01 - Preheat oven to 400°F. Line a baking sheet with parchment paper or aluminum foil.
02 - In a medium mixing bowl, combine the chipotle peppers, honey, olive oil, apple cider vinegar, minced garlic, smoked paprika, kosher salt, and black pepper. Whisk until smooth and well blended. Reserve 2 tablespoons of the sauce for glazing later.
03 - Pat the chicken thighs dry with paper towels. Arrange them skin-side up on the prepared baking sheet.
04 - Using a basting brush, generously coat each chicken thigh with the chipotle-honey sauce, ensuring even coverage on all sides.
05 - Bake for 30 minutes, or until the juices run clear and the skin is golden brown and crisp.
06 - Remove the baking sheet from the oven. Brush the chicken thighs with the reserved sauce. Sprinkle the shredded smoked Gouda evenly over each thigh.
07 - Return to the oven for 5 minutes, or until the cheese is fully melted and bubbling.
08 - Transfer to a serving platter, garnish with chopped fresh cilantro, and serve immediately with lime wedges alongside.